BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G05SP1|AL428270
(1004 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig565 1958 0.0
>3x_Contig565
Length = 3548
Score = 1958 bits (982), Expect = 0.0
Identities = 994/1004 (99%)
Strand = Plus / Plus
Query: 1 acctaaataaatatgaaattgatgaaactggcgagggctgggaagaatcttccaaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 acctaaataaatatgaaattgatgaaactggcgagggctgggaagaatcttccaaagaat 1769
Query: 61 tgtcaaaagctgtcaaatcccaaggaactgtggccatcaagtccggcaagaagagaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1770 tgtcaaaagctgtcaaatcccaaggaactgtggccatcaagtccggcaagaagagaaaac 1829
Query: 121 aagaaagtgcagaacaaattctcaacgaagagatggcaccatccaggaagttcaagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1830 aagaaagtgcagaacaaattctcaacgaagagatggcaccatccaggaagttcaagaaga 1889
Query: 181 aaggtaaaarataaatgctgtaaaatagaataavatatacatatatggtaaatataccca 240
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1890 aaggtaaaaaataaatgctgtaaaatagaataaaatatacatatatggtaaatataccca 1949
Query: 241 atccttttatcatcgttaaaccaacgcttgtctaatggctgaccgtcttgtcatcttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 atccttttatcatcgttaaaccaacgcttgtctaatggctgaccgtcttgtcatcttgca 2009
Query: 301 ggttatgaccgatggaaaacagcgttaccctgctaatcacatagtacgtaggtgatgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 ggttatgaccgatggaaaacagcgttaccctgctaatcacatagtacgtaggtgatgtct 2069
Query: 361 ttctcccattgaraaaatcgaacaaaacgaaaagcgtgaaaactgaratgctagtttaav 420
|||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2070 ttctcccattgaaaaaatcgaacaaaacgaaaagcgtgaaaactgaaatgctagtttaaa 2129
Query: 421 agaagaagagagatgcttaatgattgctttatggtacgggttgtttcgttacagccgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 agaagaagagagatgcttaatgattgctttatggtacgggttgtttcgttacagccgttg 2189
Query: 481 cttacctttatcatagtacccaaatatacatataccaagaraatataaatdatggtggaa 540
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 2190 cttacctttatcatagtacccaaatatacatataccaagaaaatataaataatggtggaa 2249
Query: 541 ttaactgagttgactgaagaatcccctattaaccaaaccacagctggggaaactcttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2250 ttaactgagttgactgaagaatcccctattaaccaaaccacagctggggaaactcttgct 2309
Query: 601 gatccagctgtcgattctcttcaacaagcagatgaatctgatgaagaggagttctccagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2310 gatccagctgtcgattctcttcaacaagcagatgaatctgatgaagaggagttctccagc 2369
Query: 661 gatgatgaggacctttatgaagatgaaaatatctatgaragattgattgccttgaaggat 720
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2370 gatgatgaggacctttatgaagatgaaaatatctatgaaagattgattgccttgaaggat 2429
Query: 721 attatcccacctcaaaagagaaagaccatctcttttttgtacaacggaactgtctctcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2430 attatcccacctcaaaagagaaagaccatctcttttttgtacaacggaactgtctctcta 2489
Query: 781 ttcagtagtgtgttttctaagagtggtaacttattgtgggctgtgactacctctgcattg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 ttcagtagtgtgttttctaagagtggtaacttattgtgggctgtgactacctctgcattg 2549
Query: 841 ttattgggtgttcctctatccttgtcaatcttggccgaacaacaattgattgagatggag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2550 ttattgggtgttcctctatccttgtcaatcttggccgaacaacaattgattgaaatggag 2609
Query: 901 aagagcttcgatctacaaaaggatgctaatgatattttggctgctggtgagggtgcttcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 aagagcttcgatctacaaaaggatgctaatgatattttggctgctggtgagggtgcttcc 2669
Query: 961 ccagcttctccaggtgccccagcaactgccatttwagtggaagt 1004
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2670 ccagcttctccaggtgccccagcaactgccatttaagtggaagt 2713
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7995
Number of Sequences: 1807
Number of extensions: 7995
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)